Class: Task¶
A meaningful participant paradigm, such as a task, resting-state protocol, stimulation, or passive viewing, performed in association with an acquisition. A Task record is required wherever the study models conditions, a resting-state protocol included. Acquisitions with no paradigm do not require one, even in a longitudinal or interventional study: a structural comparison across occasions is carried by the Effect's timepoint terms and linked through Analysis.acquisitions.
URI: neurostudy_ex:Task
classDiagram
class Task
click Task href "../Task/"
Task : acquisitions
Task --> "*" Acquisition : acquisitions
click Acquisition href "../Acquisition/"
Task : conditions
Task --> "*" Condition : conditions
click Condition href "../Condition/"
Task : description
Task --> "0..1" ExtractedString : description
click ExtractedString href "../ExtractedString/"
Task : design_type
Task --> "0..1" ExtractedDesignType : design_type
click ExtractedDesignType href "../ExtractedDesignType/"
Task : instructions
Task --> "0..1" ExtractedString : instructions
click ExtractedString href "../ExtractedString/"
Task : local_id
Task : name
Task --> "0..1" ExtractedString : name
click ExtractedString href "../ExtractedString/"
Task : paradigm
Task --> "0..1" ExtractedString : paradigm
click ExtractedString href "../ExtractedString/"
Task : performance_measures
Task --> "0..1" ExtractedStringList : performance_measures
click ExtractedStringList href "../ExtractedStringList/"
Task : presentation_software
Task --> "0..1" ExtractedString : presentation_software
click ExtractedString href "../ExtractedString/"
Task : references
Task --> "0..1" ExtractedStringList : references
click ExtractedStringList href "../ExtractedStringList/"
Task : response_modality
Task --> "0..1" ExtractedResponseModalityList : response_modality
click ExtractedResponseModalityList href "../ExtractedResponseModalityList/"
Task : stable_id
Task : stimuli
Task --> "0..1" ExtractedStringList : stimuli
click ExtractedStringList href "../ExtractedStringList/"
Task : stimulus_content
Task --> "0..1" ExtractedStringList : stimulus_content
click ExtractedStringList href "../ExtractedStringList/"
Task : stimulus_modality
Task --> "0..1" ExtractedStimulusModalityList : stimulus_modality
click ExtractedStimulusModalityList href "../ExtractedStimulusModalityList/"
Task : variant_qualifiers
Task --> "*" TaskQualifier : variant_qualifiers
click TaskQualifier href "../TaskQualifier/"
Slots¶
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| stable_id | 0..1 String |
UUID minted by the store the first time this entity appears, never by an extr... | direct |
| local_id | 1 String |
direct | |
| name | 0..1 ExtractedString |
Short, unique label for the task or paradigm; corresponds conceptually to BID... | direct |
| paradigm | 0..1 ExtractedString |
The name with every qualifier that says how this version varies taken off and... | direct |
| variant_qualifiers | * TaskQualifier |
The words of name that paradigm leaves out, each with the axis it varies ... |
direct |
| description | 0..1 ExtractedString |
Complete narrative description of what participants experienced and did | direct |
| conditions | * Condition |
The conditions this task was made of | direct |
| design_type | 0..1 ExtractedDesignType |
How the task's events were modelled in time | direct |
| acquisitions | * Acquisition |
The acquisition protocols used to collect data for this task | direct |
| presentation_software | 0..1 ExtractedString |
Stimulus-presentation software name, version, and operating system when repor... | direct |
| instructions | 0..1 ExtractedString |
Task- or paradigm-specific instructions given to participants | direct |
| references | 0..1 ExtractedStringList |
Works the source cites for this task, exactly as it writes them: an author-ye... | direct |
| stimuli | 0..1 ExtractedStringList |
The materials presented to participants, in the source's own terms -- the sti... | direct |
| stimulus_content | 0..1 ExtractedStringList |
What the task's stimuli were about when that holds across all its conditions ... | direct |
| stimulus_modality | 0..1 ExtractedStimulusModalityList |
The sensory channel the stimuli were delivered through | direct |
| response_modality | 0..1 ExtractedResponseModalityList |
How participants responded | direct |
| performance_measures | 0..1 ExtractedStringList |
Behavioral variables recorded and summaries used to verify task performance | direct |
Usages¶
| used by | used in | type | used |
|---|---|---|---|
| Analysis | tasks | range | Task |
| Study | tasks | range | Task |
Identifier and Mapping Information¶
Schema Source¶
- from schema: https://neurostuff.org/schemas/neuroimaging-study-extraction
Mappings¶
| Mapping Type | Mapped Value |
|---|---|
| self | neurostudy_ex:Task |
| native | neurostudy_ex:Task |
LinkML Source¶
Direct¶
name: Task
description: 'A meaningful participant paradigm, such as a task, resting-state protocol,
stimulation, or passive viewing, performed in association with an acquisition. A
Task record is required wherever the study models conditions, a resting-state protocol
included. Acquisitions with no paradigm do not require one, even in a longitudinal
or interventional study: a structural comparison across occasions is carried by
the Effect''s timepoint terms and linked through Analysis.acquisitions.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction
rank: 1000
attributes:
stable_id:
name: stable_id
description: UUID minted by the store the first time this entity appears, never
by an extractor, and kept across re-runs so a later extraction matches the same
entity.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Acquisition
- Device
- Analysis
- Measure
- Preprocessing
- ModelEstimation
- ModelTerm
- InferenceSettings
- Table
- CoordinateSet
- Study
range: string
pattern: ^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$
local_id:
name: local_id
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
identifier: true
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Acquisition
- Device
- Analysis
- Measure
- Preprocessing
- ModelEstimation
- ModelTerm
- InferenceSettings
- Table
- CoordinateSet
- Study
range: string
required: true
name:
name: name
description: Short, unique label for the task or paradigm; corresponds conceptually
to BIDS TaskName when applicable.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Analysis
- ModelTerm
- ExternalDataset
- PerformanceMetric
range: ExtractedString
paradigm:
name: paradigm
description: 'The name with every qualifier that says how this version varies
taken off and moved to its own field: `Stroop task` for an emotional Stroop
task, `flanker task` for an auditory flanker task, `n-back task` for a food-picture
n-back, `incentive delay task` for a monetary incentive delay task. The same
as `name` when nothing qualifies it.
This is the extractor''s split, made the same way in every paper. Whether the
stem or the qualified name is the paradigm is not a fact one paper can state;
it is decided across the corpus, in `paradigm_category`.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedString
variant_qualifiers:
name: variant_qualifiers
description: 'The words of `name` that `paradigm` leaves out, each with the axis
it varies the paradigm on. Each is also stated in its own field: a stimulus-content
qualifier in `stimulus_content`, a modality qualifier in `stimulus_modality`
or `response_modality`, a timing qualifier in `design_type`. Empty when `paradigm`
equals `name`.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: TaskQualifier
multivalued: true
inlined_as_list: true
description:
name: description
description: Complete narrative description of what participants experienced and
did.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
domain_of:
- StudyDesign
- Arm
- Group
- Task
- Condition
- Assessment
- Region
- Preprocessing
- Table
- CoordinateSet
- Study
range: ExtractedString
conditions:
name: conditions
description: The conditions this task was made of. These are the different states/modes
of the task.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
- FactorLevel
range: Condition
multivalued: true
inlined_as_list: true
design_type:
name: design_type
description: 'How the task''s events were modelled in time. Open vocabulary: write
the source''s own wording in the field when nothing here fits.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedDesignType
acquisitions:
name: acquisitions
description: The acquisition protocols used to collect data for this task. Exclude
structural scans unless they are part of the task itself.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
- Analysis
- Study
range: Acquisition
multivalued: true
inlined: false
presentation_software:
name: presentation_software
description: Stimulus-presentation software name, version, and operating system
when reported.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedString
instructions:
name: instructions
description: Task- or paradigm-specific instructions given to participants.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedString
references:
name: references
description: 'Works the source cites for this task, exactly as it writes them:
an author-year citation or a bracketed reference number, kept in the source''s
own punctuation. Copy the in-text citation; do not resolve, expand or look it
up.
Multivalued -- a task may cite the paradigm''s origin, an adaptation, and the
stimulus set separately. Empty when the source cites nothing for the task.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedStringList
stimuli:
name: stimuli
description: The materials presented to participants, in the source's own terms
-- the stimulus set, its name, how many items. One entry per distinct material;
`stimulus_modality` carries the sensory channel.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedStringList
stimulus_content:
name: stimulus_content
description: 'What the task''s stimuli were about when that holds across all its
conditions -- food pictures at every n-back load, emotional words throughout
a Stroop -- which `Condition.stimulus_content` leaves unset because it does
not tell the conditions apart. The task-level half of the stimulus facet: a
meta-analysis can ask for food stimuli across paradigms, or for Stroop tasks
across stimuli, without either question splitting the other.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
- Condition
range: ExtractedStringList
stimulus_modality:
name: stimulus_modality
description: 'The sensory channel the stimuli were delivered through. Multivalued
because a paradigm may use more than one -- a photograph with a spoken label.
Often not stated in those words: a source naming IAPS, NimStim, Ekman faces
or film clips has said `visual` without using the word. Inferring it from such
a cue is intended, and the cue is what belongs in the evidence -- not the whole
methods section.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedStimulusModalityList
response_modality:
name: response_modality
description: How participants responded. Multivalued because a paradigm often
collects more than one -- a button press for accuracy and a spoken report afterwards.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedResponseModalityList
performance_measures:
name: performance_measures
description: Behavioral variables recorded and summaries used to verify task performance.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
domain_of:
- Task
range: ExtractedStringList
Induced¶
name: Task
description: 'A meaningful participant paradigm, such as a task, resting-state protocol,
stimulation, or passive viewing, performed in association with an acquisition. A
Task record is required wherever the study models conditions, a resting-state protocol
included. Acquisitions with no paradigm do not require one, even in a longitudinal
or interventional study: a structural comparison across occasions is carried by
the Effect''s timepoint terms and linked through Analysis.acquisitions.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction
rank: 1000
attributes:
stable_id:
name: stable_id
description: UUID minted by the store the first time this entity appears, never
by an extractor, and kept across re-runs so a later extraction matches the same
entity.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
owner: Task
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Acquisition
- Device
- Analysis
- Measure
- Preprocessing
- ModelEstimation
- ModelTerm
- InferenceSettings
- Table
- CoordinateSet
- Study
range: string
pattern: ^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$
local_id:
name: local_id
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
identifier: true
owner: Task
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Acquisition
- Device
- Analysis
- Measure
- Preprocessing
- ModelEstimation
- ModelTerm
- InferenceSettings
- Table
- CoordinateSet
- Study
range: string
required: true
name:
name: name
description: Short, unique label for the task or paradigm; corresponds conceptually
to BIDS TaskName when applicable.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
owner: Task
domain_of:
- Arm
- Timepoint
- Group
- Task
- Condition
- Assessment
- Region
- Analysis
- ModelTerm
- ExternalDataset
- PerformanceMetric
range: ExtractedString
paradigm:
name: paradigm
description: 'The name with every qualifier that says how this version varies
taken off and moved to its own field: `Stroop task` for an emotional Stroop
task, `flanker task` for an auditory flanker task, `n-back task` for a food-picture
n-back, `incentive delay task` for a monetary incentive delay task. The same
as `name` when nothing qualifies it.
This is the extractor''s split, made the same way in every paper. Whether the
stem or the qualified name is the paradigm is not a fact one paper can state;
it is decided across the corpus, in `paradigm_category`.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedString
variant_qualifiers:
name: variant_qualifiers
description: 'The words of `name` that `paradigm` leaves out, each with the axis
it varies the paradigm on. Each is also stated in its own field: a stimulus-content
qualifier in `stimulus_content`, a modality qualifier in `stimulus_modality`
or `response_modality`, a timing qualifier in `design_type`. Empty when `paradigm`
equals `name`.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: TaskQualifier
multivalued: true
inlined: true
inlined_as_list: true
description:
name: description
description: Complete narrative description of what participants experienced and
did.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
owner: Task
domain_of:
- StudyDesign
- Arm
- Group
- Task
- Condition
- Assessment
- Region
- Preprocessing
- Table
- CoordinateSet
- Study
range: ExtractedString
conditions:
name: conditions
description: The conditions this task was made of. These are the different states/modes
of the task.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
- FactorLevel
range: Condition
multivalued: true
inlined: true
inlined_as_list: true
design_type:
name: design_type
description: 'How the task''s events were modelled in time. Open vocabulary: write
the source''s own wording in the field when nothing here fits.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedDesignType
acquisitions:
name: acquisitions
description: The acquisition protocols used to collect data for this task. Exclude
structural scans unless they are part of the task itself.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
- Analysis
- Study
range: Acquisition
multivalued: true
inlined: false
presentation_software:
name: presentation_software
description: Stimulus-presentation software name, version, and operating system
when reported.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedString
instructions:
name: instructions
description: Task- or paradigm-specific instructions given to participants.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedString
references:
name: references
description: 'Works the source cites for this task, exactly as it writes them:
an author-year citation or a bracketed reference number, kept in the source''s
own punctuation. Copy the in-text citation; do not resolve, expand or look it
up.
Multivalued -- a task may cite the paradigm''s origin, an adaptation, and the
stimulus set separately. Empty when the source cites nothing for the task.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedStringList
stimuli:
name: stimuli
description: The materials presented to participants, in the source's own terms
-- the stimulus set, its name, how many items. One entry per distinct material;
`stimulus_modality` carries the sensory channel.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedStringList
stimulus_content:
name: stimulus_content
description: 'What the task''s stimuli were about when that holds across all its
conditions -- food pictures at every n-back load, emotional words throughout
a Stroop -- which `Condition.stimulus_content` leaves unset because it does
not tell the conditions apart. The task-level half of the stimulus facet: a
meta-analysis can ask for food stimuli across paradigms, or for Stroop tasks
across stimuli, without either question splitting the other.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
- Condition
range: ExtractedStringList
stimulus_modality:
name: stimulus_modality
description: 'The sensory channel the stimuli were delivered through. Multivalued
because a paradigm may use more than one -- a photograph with a spoken label.
Often not stated in those words: a source naming IAPS, NimStim, Ekman faces
or film clips has said `visual` without using the word. Inferring it from such
a cue is intended, and the cue is what belongs in the evidence -- not the whole
methods section.'
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedStimulusModalityList
response_modality:
name: response_modality
description: How participants responded. Multivalued because a paradigm often
collects more than one -- a button press for accuracy and a spoken report afterwards.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedResponseModalityList
performance_measures:
name: performance_measures
description: Behavioral variables recorded and summaries used to verify task performance.
from_schema: https://neurostuff.org/schemas/neuroimaging-study-extraction/task
rank: 1000
owner: Task
domain_of:
- Task
range: ExtractedStringList