Class: ParsedTable

A table of the paper, cell by cell.

URI: parse:ParsedTable

 classDiagram
    class ParsedTable
    click ParsedTable href "../ParsedTable/"
      ParsedTable : caption

      ParsedTable : column_headings

      ParsedTable : coordinate_space_hint





        ParsedTable --> "0..1" ReportedSpace : coordinate_space_hint
        click ReportedSpace href "../ReportedSpace/"



      ParsedTable : footer

      ParsedTable : label

      ParsedTable : number

      ParsedTable : raw_path

      ParsedTable : rows





        ParsedTable --> "*" TableRow : rows
        click TableRow href "../TableRow/"



      ParsedTable : table_id

      ParsedTable : text_span





        ParsedTable --> "0..1" TextSpan : text_span
        click TextSpan href "../TextSpan/"



      ParsedTable : triage





        ParsedTable --> "0..1" TableTriage : triage
        click TableTriage href "../TableTriage/"

Slots

Name	Cardinality and Range	Description	Inheritance
table_id	1 String	The table's key, as the source's parser names it	direct
label	0..1 String	The printed label, such as Table 2 or Supplementary Table S4	direct
number	0..1 String		direct
caption	0..1 String		direct
footer	0..1 String		direct
raw_path	0..1 String	The source's raw table file, relative to the bundle directory	direct
column_headings	* String		direct
rows	* TableRow	The body rows, in printed order	direct
text_span	0..1 TextSpan	Where the table's rows are inlined in the text, when the source inlines them	direct
coordinate_space_hint	0..1 ReportedSpace	The source parser's own guess at the table's space	direct
triage	0..1 TableTriage		direct

Usages

used by	used in	type	used
ParsedPaper	tables	range	ParsedTable

Identifier and Mapping Information

Schema Source

• from schema: https://neurostuff.org/schemas/neuroimaging-paper-parse

Mappings

Mapping Type	Mapped Value
self	parse:ParsedTable
native	parse:ParsedTable

LinkML Source

Direct

name: ParsedTable
description: A table of the paper, cell by cell.
from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse
rank: 1000
attributes:
  table_id:
    name: table_id
    description: 'The table''s key, as the source''s parser names it. Stable for the
      life of the parsed paper and used unchanged by every consumer: the coordinate
      parse''s `table_id`s, the record''s Table.id, neurostore''s Table.t_id. Never
      renumbered from the printed label and never sanitized differently on disk.'
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    identifier: true
    domain_of:
    - ParsedTable
    - ParsedAnalysis
    - TableReading
    range: string
    required: true
  label:
    name: label
    description: The printed label, such as Table 2 or Supplementary Table S4.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    domain_of:
    - Reference
    - Supplement
    - ParsedTable
    - ParsedPoint
    range: string
  number:
    name: number
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: string
  caption:
    name: caption
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: string
  footer:
    name: footer
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: string
  raw_path:
    name: raw_path
    description: The source's raw table file, relative to the bundle directory.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: string
  column_headings:
    name: column_headings
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: string
    multivalued: true
  rows:
    name: rows
    description: The body rows, in printed order.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: TableRow
    multivalued: true
    inlined_as_list: true
  text_span:
    name: text_span
    description: Where the table's rows are inlined in the text, when the source inlines
      them.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    domain_of:
    - Citation
    - ParsedTable
    - TableRow
    - ParsedPoint
    - Threshold
    range: TextSpan
    inlined: true
  coordinate_space_hint:
    name: coordinate_space_hint
    description: 'The source parser''s own guess at the table''s space. A hint for
      the coordinate stages, not an answer: the space a point is stored in is the
      coordinate parse''s.'
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: ReportedSpace
  triage:
    name: triage
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    domain_of:
    - ParsedTable
    range: TableTriage
    inlined: true

Induced

name: ParsedTable
description: A table of the paper, cell by cell.
from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse
rank: 1000
attributes:
  table_id:
    name: table_id
    description: 'The table''s key, as the source''s parser names it. Stable for the
      life of the parsed paper and used unchanged by every consumer: the coordinate
      parse''s `table_id`s, the record''s Table.id, neurostore''s Table.t_id. Never
      renumbered from the printed label and never sanitized differently on disk.'
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    identifier: true
    owner: ParsedTable
    domain_of:
    - ParsedTable
    - ParsedAnalysis
    - TableReading
    range: string
    required: true
  label:
    name: label
    description: The printed label, such as Table 2 or Supplementary Table S4.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    owner: ParsedTable
    domain_of:
    - Reference
    - Supplement
    - ParsedTable
    - ParsedPoint
    range: string
  number:
    name: number
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: string
  caption:
    name: caption
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: string
  footer:
    name: footer
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: string
  raw_path:
    name: raw_path
    description: The source's raw table file, relative to the bundle directory.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: string
  column_headings:
    name: column_headings
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: string
    multivalued: true
  rows:
    name: rows
    description: The body rows, in printed order.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: TableRow
    multivalued: true
    inlined: true
    inlined_as_list: true
  text_span:
    name: text_span
    description: Where the table's rows are inlined in the text, when the source inlines
      them.
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    owner: ParsedTable
    domain_of:
    - Citation
    - ParsedTable
    - TableRow
    - ParsedPoint
    - Threshold
    range: TextSpan
    inlined: true
  coordinate_space_hint:
    name: coordinate_space_hint
    description: 'The source parser''s own guess at the table''s space. A hint for
      the coordinate stages, not an answer: the space a point is stored in is the
      coordinate parse''s.'
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: ReportedSpace
  triage:
    name: triage
    from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse/paper
    rank: 1000
    owner: ParsedTable
    domain_of:
    - ParsedTable
    range: TableTriage
    inlined: true