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Enum: ReportedSpace

The coordinate space a point is in, normalized to the values NiMARE transforms between by study_schema.spaces.normalize_space. Absent when no space is stated, or when the wording names both MNI and TAL; never defaulted to MNI: a rat study stored as MNI is a wrong coordinate, and a missing one is an honest gap. What the paper printed stays in space_as_printed.

URI: parse:ReportedSpace

Permissible Values

Value Meaning Description
MNI None Any MNI template (MNI152, MNI305, ICBM152, SPM's MNI)
TAL None Talairach space, including Talairach-transformed MNI coordinates the paper re...
OTHER None A stated space that is neither, such as a native, surface, or non-human templ...

Slots

Name Description
coordinate_space_hint The source parser's own guess at the table's space
coordinate_space The space of the analysis's points; absent when the paper states none
space Only when it differs from the analysis's coordinate_space

Identifier and Mapping Information

Schema Source

  • from schema: https://neurostuff.org/schemas/neuroimaging-paper-parse

LinkML Source

name: ReportedSpace
description: 'The coordinate space a point is in, normalized to the values NiMARE
  transforms between by `study_schema.spaces.normalize_space`. Absent when no space
  is stated, or when the wording names both MNI and TAL; never defaulted to MNI: a
  rat study stored as MNI is a wrong coordinate, and a missing one is an honest gap.
  What the paper printed stays in `space_as_printed`.'
from_schema: https://neurostuff.org/schemas/neuroimaging-paper-parse
rank: 1000
permissible_values:
  MNI:
    text: MNI
    description: Any MNI template (MNI152, MNI305, ICBM152, SPM's MNI).
  TAL:
    text: TAL
    description: Talairach space, including Talairach-transformed MNI coordinates
      the paper reports as Talairach.
  OTHER:
    text: OTHER
    description: A stated space that is neither, such as a native, surface, or non-human
      template space.