Slot: modality¶

Imaging or recording modality. A value in the Modality vocabulary also names the class holding this acquisition's modality-specific parameters, through that value's instantiates.

Open vocabulary: write the source's own wording in the field when nothing here fits, because the value is required and a closed range would discard the whole acquisition over one unrecognised word. Only a vocabulary value carries an instantiates, so an acquisition outside it resolves to the base class until normalization maps the wording back on -- which is why acquisition_type is derived rather than extracted, and why an unmapped modality is worth reporting.

URI: neurostudy:modality

Applicable Classes¶

Name	Description	Modifies Slot
Acquisition	A modality-agnostic protocol used to acquire neuroimaging or associated physi...	no
MRI	An MRI acquisition of any kind -- functional, structural, or diffusion, as mo...	no
EEG	A scalp EEG acquisition	no
FNIRS	An fNIRS acquisition	no
PET	A PET acquisition	no
OtherModality	An acquisition whose modality has no class of its own: MEG, SPECT, and `other...	no

Properties¶

Type and Range¶

Property	Value
Range	String or Modality
Domain Of	Acquisition
### Cardinality and Requirements

Property	Value
Required	Yes

Slot Characteristics¶

Property	Value
Owner	Acquisition

Expressions & Logic

#### Any Of Value must satisfy at least one of: - AnonymousSlotExpression({'range': 'Modality'}) - AnonymousSlotExpression({'range': 'string'})

In Subsets¶

Identifier and Mapping Information¶

Schema Source¶

from schema: https://neurostuff.org/schemas/neuroimaging-study-storage

Mappings¶

Mapping Type	Mapped Value
self	neurostudy:modality
native	neurostudy:modality

LinkML Source¶

name: modality
description: 'Imaging or recording modality. A value in the Modality vocabulary also
  names the class holding this acquisition''s modality-specific parameters, through
  that value''s `instantiates`.

  Open vocabulary: write the source''s own wording in the field when nothing here
  fits, because the value is required and a closed range would discard the whole acquisition
  over one unrecognised word. Only a vocabulary value carries an `instantiates`, so
  an acquisition outside it resolves to the base class until normalization maps the
  wording back on -- which is why `acquisition_type` is derived rather than extracted,
  and why an unmapped modality is worth reporting.'
in_subset:
- mvp
- model_extracted
from_schema: https://neurostuff.org/schemas/neuroimaging-study-storage
rank: 1000
owner: Acquisition
domain_of:
- Acquisition
range: string
required: true
any_of:
- range: Modality
- range: string